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Journal of Ecology

Wiley

Preprints posted in the last 30 days, ranked by how well they match Journal of Ecology's content profile, based on 49 papers previously published here. The average preprint has a 0.04% match score for this journal, so anything above that is already an above-average fit.

1
Lack of co-ordination of stomatal, hydraulic and leaf browning traits in 16 perennial Australian grass species of differing climate origins

Arjunan, K.; Jacob, V.; Yang, J.; Choat, B.; Pendall, E.; Power, S.; Tissue, D.; Medlyn, B.

2026-07-06 ecology 10.64898/2026.07.04.736528 medRxiv
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Grasslands are vulnerable to increasing drought with global warming, but process-based models lack the mechanistic knowledge required to predict the magnitude of drought impacts. While a plant hydraulics framework has been successful in advancing process understanding of drought responses in trees, and how drought responses vary across rainfall gradients, similar approaches have rarely been applied to grasses. Here, we quantified the progression of key drought response processes in sixteen dominant perennial grasses (seven C3 and nine C4) with differing climatic origins across eastern Australia. We found that stomatal closure, hydraulic impairment and leaf browning occurred concurrently, in contrast to the progressive sequence typically observed in trees. We also found that drought response traits were not correlated with species climate of origin. The early impairment of leaf hydraulic conductance and leaf browning along with the lack of correlation with climate of origin suggest that grasses may employ fundamentally different strategies to adapt to low water availability than trees. These results highlight the need for grass-specific parameterization of drought responses in process-based models.

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Bulb bankruptcy: energy dynamics in Eucomis autumnalis, a South African mesic grassland geophyte

Morris, C.; Nkuna, S.

2026-07-03 ecology 10.64898/2026.07.02.735992 medRxiv
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Repeated grazing and trampling can reduce forb populations in South African mesic grasslands by limiting photosynthesis and depleting carbohydrate reserves stored in underground organs. We examined the effects of repeated defoliation on growth, bulb starch reserves and water status in the geophyte Eucomis autumnalis over 468 days. Four intense summer and autumn defoliations reduced above-ground production, bulb mass, starch reserves and bulb water pools, with the strongest impacts occurring in late summer and autumn when plants normally replenish reserves. Repeated defoliation disrupted seasonal source sink dynamics, forcing resources into regrowth and driving bulbs towards energetic bankruptcy. These results highlight the importance of avoiding heavy autumn grazing and providing periodic full-year rests to conserve geophytic forbs in mesic grasslands.

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Species-specific drivers of genetic diversity are decoupled from plant community diversity

Abdelwahed, L.; Favre-Bac, L.; Rahnamae, N.; Way, F.; Poulain, N.; Ali, T.; Eskelinen, A.; Till-Bottraud, I.; de Meaux, J.

2026-06-26 ecology 10.64898/2026.06.25.734591 medRxiv
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Understanding how habitat connectivity shapes biodiversity remains a major ecological challenge. In particular, the roles of connectivity and ecological heterogeneity on co-variation in plant species diversity and intraspecific genetic diversity is not understood. We combined species distribution modelling, resistance-to-movement mapping, landscape connectivity analysis and population genomics to investigate diversity patterns in three wet meadow herbs, Scorzonera humilis, Oenanthe peucedanifolia and Lychnis flos-cuculi, and their surrounding plant communities. Genetic diversity patterns differed strongly among co-occurring species. Connectivity metrics explained genetic diversity only in O. peucedanifolia, and environmental drivers of genetic diversity were highly species specific. Importantly, genetic diversity changed with the presence of some species in the community, but it was consistently unrelated to indicators of local plant community diversity. Overall, the processes shaping within-species biodiversity may differ fundamentally from those structuring habitat connectivity and plant species communities, with important implications for conservation.

4
Herbivores and pathogens can modulate plant population responses to future climate conditions

Andrzejak, M.; Knight, T.; Korell, L.

2026-07-08 ecology 10.64898/2026.07.07.736959 medRxiv
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Climate change is expected to alter plant populations not only through direct environmental shifts but also via changes in biotic interactions, such as with herbivores and pathogens. As plant species are also expected to differ in their responses to both climate and antagonists, plant responses to both factors are expected to be variable and species-specific. To assess whether interactive effects of climate and antagonists on plant population dynamics are common and whether the strength and direction of plant responses vary across species, we conducted a multi-year field experiment that manipulated realistic climate change and experimentally reduced insect herbivores and fungal pathogens. We measured responses of plant vital rates, such as survivorship, growth, and reproduction across six grassland species. Using Integral Projection Models (IPMs) and Life Table Response Experiments (LTREs), we quantified changes in population growth rate across experimental treatments and the contribution of each vital rate to that observed change. Two of the study species declined so drastically over the course of the experiment that demographic quantification of population growth rates was not possible. From the remaining species, Bromus erectus and Plantago lanceolata show significant interactive responses of climate and antagonist reduction on population growth rates. In contrast, Dianthus carthusianorum and Tragopogon orientalis showed limited responses to experimental treatments. Notably, our results indicate that in some species biotic interactions may amplify the effects of climate change: the presence of plant antagonists exacerbates the negative effects of the future climate treatment on plant population dynamics. Our findings highlight the complexity in predicting plant population responses to climate change and provide insights for grassland management under future environmental conditions.

5
Assessing the influence of edge effects on macrofaunal contributions to decomposition rates across forest-field ecotones.

Niles, T. E.; Taheri, C.; Buchkowski, R. W.

2026-06-25 ecology 10.64898/2026.06.24.734239 medRxiv
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Understanding the relationships between soil macrofauna and decomposition is crucial for predicting how land-use change impacts ecosystem function in fragmented systems. This is because soil macrofauna affect decomposition and also respond to the changes in abiotic conditions across habitat gradients. This study investigates edge effects on the macrofauna contributions to decomposition across forest-field ecotones. We used bait lamina assay to quantify aboveground and belowground feeding activity of soil macrofauna in Autumn 2025 in three deciduous forest-old field ecotones and one coniferous forest-old field ecotone, in Southwestern Ontario, Canada. Vegetation diversity and composition, LAI and soil characteristics (i.e., soil organic matter, pH, temperature and moisture) were measured at each plot along the ecotone. Pitfall trap data collected in Summer 2025 at the same sites were used to characterize macrofauna communities. We used generalized linear mixed effects models to estimate the effect of distance to edge, site, and depth into the soil on bait lamina consumption and soil macrofauna, with transect nested within site as random effects. Consumption activity increased with distance into the forest from the field, with the edge representing an intermediate; and, decreased with increasing depth into the soil. In contrast, soil macrofauna abundance, especially isopods, decrease with distance into the forest from the field. These trends varied significantly across sites, so that consumption activity and abundance sometimes remained constant across the ecotone (i.e., site x distance interaction). The results demonstrate that macrofaunal contributions to bait consumption varied along the ecotone, shaped by interacting environmental gradients and shifts in community composition unique to each site.

6
From field naturalism to Bayesian models: fog-frost interaction shapes growth form partitioning along Himalayan gradient

Wangda, P.; Whitman, M.; Ohsawa, M.; Ashton, P. S.

2026-06-30 ecology 10.64898/2026.06.25.733531 medRxiv
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AO_SCPLOWBSTRACTC_SCPLOWMountain gradients facilitate our understanding of species range limits, competition dynamics, stress-resilience trade-offs, and determinants of vegetation zone boundaries. Forest compositional models often use altitude as the main predictor, a proxy for temperature that is defensible where floristic transitions are gradual and climate relationships are linear. However, mountains with distinct assemblages, representing tropical gradients or areas with complex biogeographic history, require a modeling framework that reflects non-linear dynamics or interactions between environmental factors, including outlier events (rather than mean conditions). Our study system encompasses both tropical and temperate forests along a broad ([~]3000 m) altitudinal gradient, positioned within a narrow latitudinal band (< 1{degrees}) and composed of mature, continuous forest in the Bhutan Himalaya. To represent the breadth of climatic conditions experienced over a trees lifetime, we used a Bayesian modeling paradigm and integrated multi-generational field knowledge to develop a priori hypotheses and informed priors, with consideration of monsoon seasonality and possible ecophysiological thresholds. Our approach followed three stages (the Pattern, the Mechanism, the Test). Specifically, we interpolated microclimate data and derived custom metrics based on thermodynamics, propagating uncertainty into subsequent models to test whether climate posteriors outperformed altitude in explaining growth form partitioning. For spatial patterns, we identified six distinct vegetation zones (encompassing 145 species from 57 families), with a mid-gradient peak in richness at the tropical-temperate transition zone, and convergence of deciduousness at either end of the gradient. For individual growth forms, abundance was tied to different ecological mechanisms, explained by adaptations to climatic stressors and competition trade-offs. For instance, evergreen broad-leaved dominance was linked to ephemeral cloud immersion, whereas tropical deciduous species were affiliated with higher vapor pressure deficit at lower altitudes. Most importantly, compositional (between-group) models showed that the interaction between frost events and fog probability (air saturation prior to the dry season) governed growth form partitioning more than any single factor; temperate deciduous species, confined to a narrow altitudinal band, exemplified this finding. Our methodological approach is transferable to other data-sparse mountain systems, and our results highlight the vulnerability of unique habitat types and montane endemics under climate change scenarios that alter the fog-frost dynamics. Second abstract in DzongkhaTo see the second abstract in Dzongkha, the official language of Bhutan, please visit our Zenodo site: https://doi.org/10.5281/zenodo.19081441.

7
Carbon limitation decouples roots but not leaves from nitrogen-fixing mutualists

Bartsch, L. J. R.; Leal, L. C.; Nogueira, A.

2026-07-09 ecology 10.64898/2026.07.03.736439 medRxiv
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While mutualistic symbioses with nitrogen-fixing bacteria enable plants to access fixed nitrogen, they also require substantial carbon investment. Under carbon limitation, such as shading, shifts in biomass allocation can decouple symbiotic investment from leaf and root growth, potentially compromising plant nitrogen status. Because shading shifts biomass allocation toward light acquisition, it could influence nitrogen fixing symbiosis in two opposing ways. If nodulation remains coupled to leaves rather than roots, nitrogen status should be maintained despite reduced root growth. Alternatively, if root growth constrains nodulation, nitrogen status should decline. We tested these hypotheses by manipulating light availability (full sunlight vs. 50% shade) and quantifying biomass allocation and symbiotic nodulation. Under shading, plants allocated proportionally more biomass to shoots than to roots and invested less biomass in root nodules. Relationships between nodulation and leaf or root biomass differed between treatments but converged with increasing plant size, although shaded plants never attained the root biomass observed in full sunlight. Leaf nitrogen concentration was maintained under shading because nodulation remained coupled to leaf investment despite reduced root allocation. These findings highlight that, under carbon limitation, maintaining leaf and nodule coupling enables plants to reduce nodule investment without compromising the nitrogen benefits of symbiosis.

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Temporal variability and its effects on diversity maintenance in an agroecological matrix

Zepeda, V.; Garcia Jacome, L. G.; Azpeitia, E.; Abrica-Jacinto, N. L.; Benitez, M.

2026-07-13 ecology 10.64898/2026.07.10.737830 medRxiv
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Agroecosystems are dynamic ecosystems, constituted by patches of vegetation and agricultural use, where biodiversity is shaped by spatial and temporal variability. While most studies have focused on spatial composition and configuration, the role of temporal variability remains poorly understood. Yet, temporal dynamics can strongly modify species composition, abundance, and persistence in ecological communities. Temporal variability is particularly relevant in agroecosystems with rainfed agriculture where environmental conditions shift dramatically between rainy and dry seasons. In this paper, we assess the role of temporal variability on biodiversity maintenance in an agricultural matrix using a metacommunity model that simulates an agricultural landscape under rainfed conditions, that is, with abrupt seasonal changes in the agricultural patches. This model couples a local community network dynamic with a migration dynamic and is based on empirically documented features of rainfed agricultural matrices. Our results show that temporal variability provides new opportunities for species to recover from low densities. However, the effect of temporal variability is not straightforward. It depends on the initial and final conditions, the migration and mortality rates and the intensity of temporal variability. Overall, our findings highlight the need to further investigate temporal variability to better understand its role in shaping biodiversity in agricultural landscapes.

9
Pollination responses to artificial light at night may vary with lighting arrangement

Li, D.; Adeniji, L. A. J.; Meah, R. J.; Clements, C. F.

2026-07-10 ecology 10.64898/2026.07.10.737511 medRxiv
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Artificial light at night (ALAN) can alter the movement of nocturnal pollinators such as moths, with potential consequences for pollination services. However, most studies have focused on the presence or properties of lights, while the role of spatial lighting configuration remains poorly understood. We conducted a small-scale field experiment to test how different lighting configurations affect pollination success in moth-pollinated plants, using low-intensity LED garden lights. Potted phytometer plants of three moth-pollinated species were exposed to one of three treatments: no-light control, isolated LED point lights, or 25 m linear arrays of multiple LED lights. We quantified pollination success as both the probability of seed set and reproductive output through seed and capsule production. Experimental lighting affected plant reproductive success, with light arrays increasing seed-set probability, seed and seed capsule number relative to unlit controls, whereas point lights showed no clear effect. These results provide preliminary evidence that the spatial configuration of artificial lights may influence nocturnal pollination outcomes. Future work combining phytometer assays with direct tracking of moth movement is needed to assess whether light arrays facilitate or redirect the dispersal of nocturnal pollinators.

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Anthropogenic subsidies reshape Ruby-throated Hummingbird (Archilochus colubris) interactions across spatial and temporal contexts: evidence from community-collected data

Narango, D. L.; Jones, A.; Rebozo, R.; Sosa, P.; Hallworth, M.

2026-07-06 ecology 10.64898/2026.07.03.733347 medRxiv
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1. Ruby-throated hummingbirds (Archilochus colubris) exhibit flower preferences and readily visit human subsidies like feeders. However, foraging behavior and plant-animal interactions may vary across spatial, temporal, and landscape gradients. Despite the popularity and ubiquity of Ruby-throated Hummingbirds in the eastern U.S., there has never been a quantitative assessment of their flower preferences or feeder use across broad scales. 2. We investigated how feeder visitation, flower visitation, and flower trait preferences vary by latitude, season, and land use in the northeastern United States using over 6 million occurrence records of Ruby-throated Hummingbirds and flowering plants, >2,100 annotated hummingbird-flower interactions, and >2,700 feeder visit occurrences. 3. We found that hummingbird feeder use declined over the year, increased with latitude, and was higher in developed landscapes. Flower visitation increased over the year across all latitudes, with higher visitation in developed landscapes. Finally, we found that native plant use diverged between landscapes, such that the probability of visiting a native flower increased over time in non-developed land uses but declined over time in developed ones, demonstrating that hummingbirds track the advancement of native floral phenology and use non-native, cultivated flowers as a human subsidy due to either availability or preferences. 4. Our preference and network models revealed that while hummingbird-plant network structure was similar across landscapes, the composition of important taxa shifted from native, wild species like Monarda and Impatiens to non-native, cultivated species like Salvia. 5. Using trait-based models of flower visitation, we found that hummingbirds preferred native, tubular, and red/orange flowers fitting the hummingbird pollination syndrome despite visiting >260 different plant species. Red and orange flowers were preferred across all seasons, suggesting color may be a reliable signal of nectar availability across species and contexts. Native and tubular flowers were strongly preferred during the breeding season; however, preferences relaxed during spring and fall migration. 6. These findings reveal the consistent preferences of Ruby-throated Hummingbirds for native, tubular, and red/orange flowers, and underscore how spatial and temporal factors reshape foraging behavior and trait preferences. Our results also highlight the value of community-collected data in characterizing plant-pollinator interactions across broad spatial and temporal scales.

11
Drought degrades riparian subsidy quality and constrains aquatic ecosystem functioning

Mohammadi, R. M.; Ruhi, A.

2026-07-13 ecology 10.64898/2026.07.10.737855 medRxiv
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The exchange of energy and organisms across habitat boundaries links aquatic and terrestrial ecosystems and sustains ecosystem functioning. Although disturbance may disrupt these linkages, the mechanisms at play remain poorly understood. Here, we investigated the extent to which flow intermittency may disrupt riparian-aquatic ecosystem linkages by altering consumer communities in the recipient ecosystem or by altering resource quality in the donor ecosystem. We ran an experiment in an intermittent river network in California, focusing on a critical forest-to-river subsidy (organic matter in the form of leaf litter), its transformation, and its reciprocal benefit (aquatic insect production). Using three riparian species (willow, cottonwood, and oak) at sites spanning a gradient of flow permanence, we quantified intraspecific plasticity in leaf traits (specific leaf area, nitrogen and phosphorus concentrations, and {delta}13C), measured decomposition rates, and estimated the secondary production of aquatic shredders (Plecoptera). Across all leaf species, decomposition rates were 16-36% lower at intermittent than perennial sites, an effect largely driven by intraspecific leaf trait plasticity rather than changes in consumer abundance. At high flow intermittency, willow experienced water stress (enriched {delta}13C) and reduced specific leaf area, while cottonwood showed primarily stoichiometric responses (reduced leaf nitrogen and phosphorus). Despite these divergent strategies, all species produced lower-quality litter at intermittent sites. Variance partitioning confirmed that initial litter quality uniquely explained 51.5% of variation in decomposition rates, more than double the contribution of invertebrate community metrics; and structural equation modeling revealed that both leaf traits and stonefly (Plecoptera) secondary production significantly predicted decomposition rates, with leaf traits exerting the stronger effect. Notably, stonefly secondary production was 37-98% lower at intermittent sites across leaf species. Because these insects later emerge as terrestrial adults, they provide a significant energy flux to riparian predators, and, thus, impoverished litter quality suppresses the reciprocal transfer of energy back to terrestrial food webs. As drought intensifies globally, the decoupling of terrestrial-aquatic linkages may begin in the riparian canopy.

12
Climate at seed origin drives germination and seedling trait responses to warming in sessile and pubescent oaks

Carme, M.; Vicente, E.; Benito Garzon, M.

2026-06-25 ecology 10.64898/2026.06.24.734244 medRxiv
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Tree early life stages are particularly sensitive to warming, yet their responses remain poorly understood despite their importance for forest regeneration. Here, we investigated how warming affects early-life traits in two widespread European white oaks: Quercus pubescens and Q. petraea. We conducted a common garden experiment using 17 populations exposed to three temperature regimes. We measured 19 traits encompassing germination, phenology, and functional and fitness-related traits and performed individual trait mixed-effects models based on temperature transfer distance and the climate of the population. We found that population climate was the primary driver of early stages traits responses to warming, with climatic drivers varying strongly among traits and species. Particularly in Q. pubescens, warmer and drier populations showed lower fitness (germination and survival percentages, total biomass) that declined further under warming, consistent with a cost of drought avoidance strategies under continuously wet conditions; in Q. petraea, continental populations outperformed others at low temperature transfer distance but suffered the steepest fitness declines under further warming, suggesting a narrow thermal optimum shaped by cold adaptation. Warming generally advanced germination and leaf emergence, increased leaf pigment concentrations and fine-root allocation, reduced specific leaf area. Extreme warming reduced survival, growth and germination. Nevertheless, moderate warming (+0 to +5{degrees}C) was rarely detrimental and sometimes beneficial. Our results demonstrate that population climatic origin is a key determinant of regeneration responses to warming, highlighting the need to consider within-species adaptive variation to understand forest regeneration potential under climate change.

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Diverging Hydroclimatic Trends in Global Tropical Dryland Ecosystems Based on ERA-5 and CHIRPS Analysis Data

Sanchez-Azofeifa, A.; Stan, K. D.; Hamann, H. F.

2026-06-25 ecology 10.64898/2026.06.23.734075 medRxiv
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Tropical dryland ecosystems are highly biodiverse and fragmented and are experiencing significant anthropogenic and climatic changes. With increasing extremes in temperature and precipitation, coupled with significant alteration, these ecosystems are at greater risk of increased exposure and vulnerability to climatic change; however, little work has quantified the climatic shifts occurring within these ecosystems globally. Here, we aim to fill this gap by using the ERA-5 reanalysis and CHIRPS precipitation data to quantify changes in essential climatic variables in tropical drylands since 2000. Overall, we find that regional pressures differ, with tropical dry forests, savannas, and shrublands becoming hotter and drier in the Neotropics and parts of the Afrotropics and Australasia. By contrast, the tropical dry forests in the Indomalayan, Oceania, and Nearctic are experiencing hotter and wetter conditions. Globally, though, these ecosystems are experiencing more change than the global average, suggesting they may be approaching tipping points in their resilience, ultimately shrinking the area where they can survive.

14
Vegetation change and functional composition shifts in southwestern China during late MIS 3 to LGM

Li, K.; Hao, Z.; Li, P.; Zhang, X.; Liu, L.; Liao, M.; Tan, Z.; Wang, Y.; Ni, J.

2026-06-26 ecology 10.64898/2026.06.25.734119 medRxiv
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The climatic transition from Marine Isotope Stage 3 (MIS3) to the Last Glacial Maximum (LGM) had caused widespread vegetation change. Despite the dynamic equilibrium between vegetation and climate, the specific role of functional composition in vegetation response to climate change was inadequately understood. Here, we analyzed the long-term trajectories of palynological diversity, vegetation coverage and community-weighted-mean (CWM) functional traits based on EH22 pollen record (35-18 cal ka BP) from Erhai Lake, southwestern China. The results disclosed a vegetation transition from temperate deciduous broadleaf forest dominance in late MIS3 to cold coniferous and mixed broadleaved/coniferous forests in LGM. This vegetation dynamic involved functional composition shifts from competitive-driven functional convergence to partial recovery via niche differentiation during the late MIS3, and finally to a low-diversity but functional differentiation state through trait complementarity and diversification strategies during the cold LGM. Our results likely support a function-mediated climate filtering process whereby climate change regulated long-term vegetation dynamics during the MIS3 to LGM transition primarily through shifts in CWM functional composition. These findings underscore the potential of pollen-based trait approaches to reconstruct ecosystem properties and advance our understanding of ecosystem change over decadal to millennial time-scales.

15
Seasonal climatic impacts on orchid productivity in an urban ecosystem

Brundrett, M.

2026-06-30 Plant Biology 10.64898/2026.06.29.735162 medRxiv
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ContextThe global diversity hotspot in Southwest Australia has >480 orchids facing increasing threats from climate extremes, fire and habitat decline. AimsTo develop effective and consistent tools for measuring climate impacts on productivity in a diverse urban orchid community. MethodsAnnual variations in flower and seed production for 17 orchids were determined using thousands of records over a decade with extreme climate variability. Key resultsRainfall deficits and temperatures in autumn, winter and spring increased substantially over 125 years. Seasonal climate anomalies reduced flowering and seed production for orchids, but this varied between species and seasons. These effects were summarised by climate response (CRI) and sensitivity (CSI) indexes. Early or late flowering species were most vulnerable to seasonal drought, and visually deceptive pollination preferred warm dry conditions. CRIs were strongly correlated with orchid pollination syndromes and flowering times. Effects on mycorrhizal fungi and pollinators were also observed. Extrapolating climate trends to 2100 predicted further impacts on orchid productivity (-5-40%). ConclusionsOrchid climate responses were diverse and deeply integrated with pollination, phenology, fire sensitivity and other key traits. ImplicationsResearch in an urban climate observatory produced a climate analysis framework that is likely relevant to many orchids and other biota.

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Ecosystem service gradients at protected area borders reveal multiple patterns and prevalent management conflicts

Gonzalez-Garcia, A.; Neyret, M.; Lopez-Tejedor, A.; Prima, M. C.; Si-Moussi, S.; Renaud, J.; Gueguen, M.; Lavorel, S.

2026-07-01 ecology 10.64898/2026.06.30.735453 medRxiv
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Protected areas cannot halt biodiversity loss in isolation; integrating them with surrounding human-dominated landscapes is critical. However, this integration is challenged by substantial landscape heterogeneity at their borders, hindering our understanding of cross-border changes in ecosystem service provision. We introduce a novel framework for characterizing these dynamics by analyzing ecosystem service gradients along protected area borders. For 16 protected areas in the French Alps, we assessed 12 ecosystem services using a mix of established biophysical models and novel connectivity-based models for mobile species. These were aggregated into three stakeholder-driven domains reflecting respectively rural, cultural, and urban management priorities. Automated polynomial regression analysis classified borders into five gradient types. The most common were 'Decreasing Gradients', representing a decline in ecosystem services outside the protected area, and 'Increasing Gradients', with the opposite pattern. Our analysis reveals these patterns are driven by specific landscape configurations, uncovering frequent trade-offs between the three management priorities, where, for instance, landscapes supporting rural priorities often degrade cultural and urban ones. We also identify key opportunities for synergies, by identifying areas where ecosystem services for all three priority domains increase simultaneously outside the protected area. This spatially explicit typology provides a powerful diagnostic tool for designing targeted interventions, such as prioritizing habitat restoration where ecosystem services decline or managing agricultural landscapes to mitigate conflicts across management priorities, supporting a more effective integration of protected areas into the wider landscape.

17
Forest degradation reshapes trophic functioning in vertebrate food webs across Amazonian forests

Antunes, A. C.; Brose, U.; Montanarin, A.; Rosenbaum, B.; Peres, C. A.; Meyer, C.; Pereira, H. M.; Hines, J.; Li, J.; Sobroza, T.; Berti, E.; Barnett, A.; Keuroghlian, A.; Zanzini, A. C. d. S.; Castro, A. B.; Thoisy, B. d.; Brocardo, C. R.; Rosa, C.; Ferraz, D. d. S.; Rocha, D. G. d.; Rosa, D. C. P.; Grabin, D. M.; Nakano-Oliveira, E.; Carvalho, E. A. R. d.; Mendonca, E. N.; Vieira, E. M.; Isasi-Catala, E.; Ramalho, E. E.; Baccaro, F.; Michalski, F.; Santos, F.; Yancha, F. A.; Palmeira, F. B. L.; Batista, G. d. A.; Zapata-Rios, G.; Neto, G. d. S. F.; Alvarenga, G. C.; Prado, H. A. d.; Costa, H

2026-07-14 ecology 10.64898/2026.07.13.737465 medRxiv
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The Amazon is a mosaic of ecosystems, accounting for 13% of all known species globally, and responsible for providing a variety of ecosystem services, including a key role in global climate regulation. However, 18% of the Amazon forest cover has been lost completely and a further 38% degraded, threatening biodiversity and millions of local livelihoods. Currently, little is known about how this impacts the functioning of ecological communities. Here, we combine an energetic approach with biodiversity metrics to quantify ecosystem functioning in mammal and bird food webs across Amazonia, along a gradient of forest degradation linked to road proximity. We show that even under relatively low disturbance, ecosystem functions shift: carnivory increases closer to roads, driven by generalist species that persist under these conditions, whereas herbivory declines mainly due to reduced herbivore biomass and species richness. This suggests that processes associated with forest degradation can alter energy flow even where biodiversity metrics remain relatively unchanged, highlighting energetic approaches as sensitive indicators of ecosystem disruption.

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Large phenological advances and delays over 124 years of climate change alter co-flowering among North American Viola

Edwards, C.; Moyle, L. C.

2026-07-02 evolutionary biology 10.64898/2026.06.27.734973 medRxiv
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Shifts in flowering phenology are one of the most well studied plant responses to global climate change. Many studies have documented these shifts and their drivers, including some that describe altered patterns of co-flowering among taxonomically broad species within communities. In comparison, few analyses have examined systematic changes in co-flowering between closely related, interfertile species, where co-flowering can have unique evolutionary consequences. To address such shifts in co-flowering among close relatives, we investigate phenological responses to climate change and its effect on patterns of co-flowering over the past 124 years in 52 species of North America violets (Viola). This genus has many co-occurring species that reproductively interact via shared pollinators and hybridization. We use ~14,000 herbarium records along with environmental and species trait data to model the magnitude of recent flowering phenology shifts, environmental variables and/or species traits associated with these shifts, and resulting changes in co-flowering among species. While both the magnitude and direction of phenological shifts varied among Viola species, nearly half (25/52) show significant changes in flowering day. Regardless of whether flowering was advanced or delayed, flowering date was most consistently associated with local mean temperature. Of six species-level traits, geographical region also significantly predicted flowering shifts, consistent with environment and geography together explaining broad phenological responses across this group. These shifts have produced significant changes to pairwise patterns of co-flowering among species -- ranging from a 59 day increase in co-flowering to complete loss of co-flowering overlap. Sympatric pairs specifically have experienced both increases and decreases in co-flowering, with a geographic pattern of increased co-flowering occurring mainly in eastern US and decreased co-flowering common in western US. Because Viola species are generalist pollinated and already known to hybridize, these new co-flowering patterns could further undermine reproductive barriers among species in this genus.

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Small stream restoration increases habitat and plant diversity across scales

Lerbs, L.; Singer, A.; Dotzert, A.; Grunwald, L.; Lampe, J.; Farwig, N.; Liepelt, S.; Willems, F. M.; Pinkert, S.; Bucharova, A.

2026-06-24 ecology 10.64898/2026.06.23.733988 medRxiv
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A majority of stream restoration efforts in central Europe focus on streams that are less than five meters wide. Restoration aims to increase structural complexity, thereby enhancing habitat heterogeneity, promoting biodiversity, and reestablishing aquatic-terrestrial linkages that can drive responses in adjacent terrestrial communities. However, the effects of small stream restoration on terrestrial biodiversity remain poorly understood because research focuses mainly on large rivers. Here, we investigated the effects of restoration on the structural complexity of the stream channel as well as the terrestrial habitat and plant diversity on a local and landscape scale across 55 small streams in an agricultural landscape. We compared restored stream sections with non-restored ones that were similar to the conditions before restoration. We also assessed how restored sections changed over time since restoration. Restored stream sections showed a higher stream structural complexity and habitat diversity, both of which are targets of active restoration measures. Restoration also increased riparian plant diversity, both directly and indirectly through structural complexity and habitat diversity. Although time since restoration did not influence structural complexity, it drove successional changes in plant communities that became increasingly associated with wetland habitat conditions. Our results demonstrate that small stream restoration effectively increases floodplain habitat and plant diversity in agricultural landscapes, primarily by enhancing water availability in the floodplain. Restoration actions on small streams support biodiversity if they improve stream channel complexity, connect the stream with its floodplain, and create floodplain habitats.

20
Diverse root fungal endophytes mediate plant access to soil nutrients

Hammer, R. A.; Lee, M. R.; Yang, N.; Kan, M.; Luecke, N.; Wilson, M.; Stuart, R. K.; Hawkes, C. V.

2026-06-29 ecology 10.64898/2026.06.27.735019 medRxiv
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Plant roots are broadly colonized by endophytic fungi with saprotrophic capabilities, but our understanding of whether they function in ways that are beneficial or detrimental to the host remains limited to model organisms. We hypothesized that endophytic fungi broadly affect plant access to soil nutrients, particularly organic forms that are typically not directly available to the plant. To address this, we paired 41 fungal endophytes with switchgrass (Panicum virgatum L.) and provided either inorganic or organic forms of nitrogen (N) and phosphorus (P). We evaluated how the fungi affected plant tissue N and P as well as plant growth. We also examined if these outcomes could be predicted from fungal phylogenetic relationships, in vitro traits of the fungi, or characteristics of the habitat from which fungi were isolated. There was substantial variation in both plant N (0.05-0.63%) and P (0.02-0.10%) acquisition that depended on the interaction of fungus and nutrient treatment. More fungi were beneficial for plant N than for P and shoot nutrients generally increased more than root nutrients from fungal associations. However, fungal effects on plant nutrients were not predicted by fungal traits, habitat traits, or fungal phylogenetic relationships. This unpredictability highlights a key challenge for incorporating endophytes into nutrient management strategies. Improving our ability to predict endophyte impacts on host nutrient acquisition will require identifying the mechanisms underlying observed beneficial effects and scaling up to realistic, diverse root microbial communities.